Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps28Q9D1C8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Gm18212-201ENSMUST00000211678 889 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps28Q9D1C8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.46□□□□□ -0.41
Vps28Q9D1C8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vps28Q9D1C8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps28Q9D1C8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps28Q9D1C8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms