Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm27331-201ENSMUST00000183705 60 ntBASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim13Q9CYB0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms