Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm11531-201ENSMUST00000117614 555 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm13297-201ENSMUST00000120205 934 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm27501-201ENSMUST00000183599 107 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm27390-201ENSMUST00000184516 176 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm28882-201ENSMUST00000185504 314 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm4034-201ENSMUST00000187674 480 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm5950-201ENSMUST00000213337 772 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Khdc3Q9CWU5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm25214-201ENSMUST00000104573 129 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm8227-201ENSMUST00000223306 571 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm7399-201ENSMUST00000032395 858 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.66□□□□□ -0.54
Khdc3Q9CWU5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Gm24934-201ENSMUST00000103764 111 ntBASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Khdc3Q9CWU5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms