Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm7775-201ENSMUST00000218871 853 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Chchd1-203ENSMUST00000224633 557 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm44069-201ENSMUST00000204898 506 ntBASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTRAFQ9CQE8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm2213-201ENSMUST00000197485 688 ntBASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Gm9063-201ENSMUST00000223299 582 ntBASIC9.84□□□□□ -0.83
RTRAFQ9CQE8 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms