Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim8Q99PJ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm9083-201ENSMUST00000120423 819 ntBASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm6091-201ENSMUST00000098307 165 ntBASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim8Q99PJ2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms