Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh15Q99PJ1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm3329-201ENSMUST00000159873 556 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm13171-201ENSMUST00000117233 391 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gm24078-201ENSMUST00000158184 103 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh15Q99PJ1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm24279-201ENSMUST00000104236 131 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Mir453-201ENSMUST00000104732 82 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm14071-201ENSMUST00000117817 509 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm11960-201ENSMUST00000122068 925 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm44814-201ENSMUST00000207018 434 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 AC022682.1-201ENSMUST00000224624 2023 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh15Q99PJ1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm22937-201ENSMUST00000103954 131 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm13422-201ENSMUST00000118834 504 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm12337-201ENSMUST00000119634 400 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm7627-201ENSMUST00000183205 999 ntBASIC13.37□□□□□ -0.27
Pcdh15Q99PJ1 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms