Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm17709-201ENSMUST00000174536 1096 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm43163-201ENSMUST00000196571 442 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm18010-201ENSMUST00000203553 202 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm2553-201ENSMUST00000215986 605 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm26782-203ENSMUST00000227103 751 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Erich3-203ENSMUST00000189969 3460 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh23Q99PF4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdh23Q99PF4 Dapk1-207ENSMUST00000226059 5009 ntBASIC12□□□□□ -0.49
Cdh23Q99PF4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm12389-201ENSMUST00000117696 418 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm22763-201ENSMUST00000158374 107 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Mir7035-201ENSMUST00000184713 82 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm5395-201ENSMUST00000121650 915 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh23Q99PF4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm43966-201ENSMUST00000203301 612 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm10580-201ENSMUST00000097985 396 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm10581-201ENSMUST00000097986 231 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm10582-201ENSMUST00000097987 396 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm10583-201ENSMUST00000097988 396 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms