Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.17■□□□□ 0.18
Rtn4Q99P72 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.17■□□□□ 0.18
Rtn4Q99P72 Gm43747-201ENSMUST00000201412 1330 ntBASIC16.17■□□□□ 0.18
Rtn4Q99P72 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4Q99P72 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm25332-201ENSMUST00000158038 105 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm27468-201ENSMUST00000183577 106 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm37932-201ENSMUST00000192258 1167 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm38241-201ENSMUST00000192641 898 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm43758-201ENSMUST00000199500 367 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm44213-201ENSMUST00000204977 703 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm45865-201ENSMUST00000211815 945 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4Q99P72 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.16■□□□□ 0.18
Rtn4Q99P72 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gm20586-201ENSMUST00000210122 547 ntBASIC16.15■□□□□ 0.18
Rtn4Q99P72 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms