Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.85□□□□□ -0.51
Msh4Q99MT2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm15703-201ENSMUST00000120250 880 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm13315-201ENSMUST00000120376 991 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.84□□□□□ -0.51
Msh4Q99MT2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh4Q99MT2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Msh4Q99MT2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Msh4Q99MT2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Msh4Q99MT2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Msh4Q99MT2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Msh4Q99MT2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm38241-201ENSMUST00000192641 898 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm6082-201ENSMUST00000215204 454 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.83□□□□□ -0.52
Msh4Q99MT2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.83□□□□□ -0.52
Msh4Q99MT2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms