Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm22018-201ENSMUST00000104357 131 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Mir1247-201ENSMUST00000116706 82 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm11964-201ENSMUST00000120982 444 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm9630-201ENSMUST00000178304 885 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm45930-201ENSMUST00000221330 292 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Olfr582-201ENSMUST00000098212 960 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp1b1Q99LU0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm13315-201ENSMUST00000120376 991 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm11597-201ENSMUST00000121423 964 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm24548-201ENSMUST00000158650 108 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm37201-201ENSMUST00000191845 523 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm38266-201ENSMUST00000194931 421 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp1b1Q99LU0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms