Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.63□□□□□ -0.39
TrabdQ99JY4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.63□□□□□ -0.39
TrabdQ99JY4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TrabdQ99JY4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.62□□□□□ -0.39
TrabdQ99JY4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.62□□□□□ -0.39
TrabdQ99JY4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm37986-201ENSMUST00000193285 383 ntBASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.62□□□□□ -0.39
TrabdQ99JY4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TrabdQ99JY4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm13035-201ENSMUST00000117496 342 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm9062-201ENSMUST00000117712 727 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm11331-201ENSMUST00000119764 288 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm23085-201ENSMUST00000157849 293 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 Gm42997-202ENSMUST00000200321 985 ntBASIC12.61□□□□□ -0.39
TrabdQ99JY4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TrabdQ99JY4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms