Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm12384-201ENSMUST00000119228 919 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm22121-201ENSMUST00000175148 54 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm27892-201ENSMUST00000185017 106 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.24□□□□□ -0.45
Cdk9Q99J95 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm24231-201ENSMUST00000104315 133 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm13123-201ENSMUST00000122173 492 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm17208-201ENSMUST00000168388 535 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm8602-201ENSMUST00000184045 607 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm5035-201ENSMUST00000215581 927 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm17794-201ENSMUST00000220252 955 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.23□□□□□ -0.45
Cdk9Q99J95 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk9Q99J95 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms