Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm17794-201ENSMUST00000220252 955 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm10012-201ENSMUST00000078252 192 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm4271-201ENSMUST00000174444 973 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm5904-201ENSMUST00000210286 865 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Thumpd1Q99J36 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms