Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm4034-201ENSMUST00000187674 480 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm29199-201ENSMUST00000187766 775 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm44262-201ENSMUST00000204969 372 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb2Q91Y00 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm18711-201ENSMUST00000199341 750 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb2Q91Y00 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Rprl1-201ENSMUST00000158050 327 ntBASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms