Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm28443-201ENSMUST00000189081 698 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Gm43805-201ENSMUST00000198488 824 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 AC107711.1-201ENSMUST00000227258 1295 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb20Q91XZ9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm19587-201ENSMUST00000191395 545 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37669-201ENSMUST00000192184 820 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm44181-201ENSMUST00000203106 483 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm18054-201ENSMUST00000207539 555 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 AC167977.2-201ENSMUST00000225676 682 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb20Q91XZ9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb20Q91XZ9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb20Q91XZ9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb20Q91XZ9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb20Q91XZ9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb20Q91XZ9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms