Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb17Q91VD8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb17Q91VD8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.28□□□□□ -0.28
Pcdhb17Q91VD8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 AC122367.1-201ENSMUST00000221978 1709 ntBASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb17Q91VD8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm13392-201ENSMUST00000117708 150 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Mup-ps14-201ENSMUST00000118437 532 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm22817-201ENSMUST00000157448 356 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm17420-201ENSMUST00000164753 153 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm37989-201ENSMUST00000195202 803 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 AC121804.1-201ENSMUST00000221016 394 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb17Q91VD8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm14413-201ENSMUST00000122158 408 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm22818-201ENSMUST00000157446 104 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm16296-201ENSMUST00000159905 325 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm43693-201ENSMUST00000196072 1249 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm43438-201ENSMUST00000198133 379 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm44954-201ENSMUST00000208513 227 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Gm19309-201ENSMUST00000218295 205 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb17Q91VD8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms