Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm19080-201ENSMUST00000196082 550 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm18624-201ENSMUST00000220966 658 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa1Q8VEE4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Snord83b-201ENSMUST00000104546 94 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Mir6392-201ENSMUST00000184924 108 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms