Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Gm23699-201ENSMUST00000158835 135 ntBASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Gm45118-201ENSMUST00000208928 825 ntBASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Dnajc28Q8VCE1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm14644-201ENSMUST00000116671 647 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm15711-201ENSMUST00000118889 535 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm9230-201ENSMUST00000188228 532 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnajc28Q8VCE1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.29□□□□□ -0.28
Dnajc28Q8VCE1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms