Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.32□□□□□ -0.28
Rpap2Q8VC34 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm5419-201ENSMUST00000119301 527 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm17376-201ENSMUST00000166016 84 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm25890-201ENSMUST00000177643 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm22614-201ENSMUST00000178300 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm38241-201ENSMUST00000192641 898 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm18893-201ENSMUST00000198416 943 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm22042-201ENSMUST00000082989 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Gm26110-201ENSMUST00000083971 165 ntBASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpap2Q8VC34 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm13296-201ENSMUST00000117854 997 ntBASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.3□□□□□ -0.28
Rpap2Q8VC34 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpap2Q8VC34 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms