Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm15547-201ENSMUST00000122152 333 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm10312-201ENSMUST00000078515 489 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim29Q8R2Q0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm2991-201ENSMUST00000173338 480 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm38266-201ENSMUST00000194931 421 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim29Q8R2Q0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Gm6621-201ENSMUST00000193251 772 ntBASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Gm31256-201ENSMUST00000194705 506 ntBASIC13.85□□□□□ -0.19
Trim29Q8R2Q0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms