Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm12091-201ENSMUST00000146791 830 ntBASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm27437-201ENSMUST00000183429 107 ntBASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd3Q8R1N4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Gm22331-201ENSMUST00000158066 136 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Nudcd3Q8R1N4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd3Q8R1N4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms