Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm25927-201ENSMUST00000175058 117 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Mir7023-201ENSMUST00000185093 64 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm8420-201ENSMUST00000097103 598 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ebf4Q8K4J2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm15487-201ENSMUST00000122373 465 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm17208-201ENSMUST00000168388 535 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm27306-201ENSMUST00000183970 107 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf4Q8K4J2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.02□□□□□ -0.64
Ebf4Q8K4J2 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms