Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.46□□□□□ -0.57
Clrn1Q8K445 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm14381-201ENSMUST00000122105 414 ntBASIC11.46□□□□□ -0.57
Clrn1Q8K445 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm43758-201ENSMUST00000199500 367 ntBASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.46□□□□□ -0.57
Clrn1Q8K445 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn1Q8K445 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clrn1Q8K445 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn1Q8K445 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Gm11930-201ENSMUST00000117788 190 ntBASIC11.45□□□□□ -0.58
Clrn1Q8K445 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn1Q8K445 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clrn1Q8K445 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.44□□□□□ -0.58
Clrn1Q8K445 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.44□□□□□ -0.58
Clrn1Q8K445 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.44□□□□□ -0.58
Clrn1Q8K445 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms