Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm6013-201ENSMUST00000212264 699 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc87Q8CDL9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc87Q8CDL9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ccdc87Q8CDL9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc87Q8CDL9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc87Q8CDL9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc87Q8CDL9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm38002-201ENSMUST00000193255 180 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm18054-201ENSMUST00000207539 555 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc87Q8CDL9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms