Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Gm13916-201ENSMUST00000117368 628 ntBASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a6Q8C6K9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm11509-201ENSMUST00000117358 325 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm11663-201ENSMUST00000117888 290 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm15207-201ENSMUST00000119259 442 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm29410-201ENSMUST00000188383 694 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm37299-201ENSMUST00000193951 826 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm5100-201ENSMUST00000195631 589 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Mir483-201ENSMUST00000093631 73 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm17877-201ENSMUST00000192578 814 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a6Q8C6K9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms