Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm5187-201ENSMUST00000117317 991 ntBASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm17420-201ENSMUST00000164753 153 ntBASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm4768-201ENSMUST00000206199 686 ntBASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gm19163-201ENSMUST00000223313 780 ntBASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rft1Q8C3B8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.87□□□□□ -0.67
Rft1Q8C3B8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Gm10478-201ENSMUST00000084451 396 ntBASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rft1Q8C3B8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rft1Q8C3B8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms