Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm18935-201ENSMUST00000212692 664 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Olfr582-201ENSMUST00000098212 960 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trerf1Q8BXJ2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.9□□□□□ -0.35
Trerf1Q8BXJ2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Trerf1Q8BXJ2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trerf1Q8BXJ2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm27516-201ENSMUST00000184237 98 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm38266-201ENSMUST00000194931 421 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm5904-201ENSMUST00000210286 865 ntBASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms