Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm27046-201ENSMUST00000182160 463 ntBASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.44□□□□□ -0.42
Sfr1Q8BP27 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sfr1Q8BP27 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm24934-201ENSMUST00000103764 111 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm14109-201ENSMUST00000118814 309 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms