Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Gm22146-201ENSMUST00000157397 288 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Gm20495-201ENSMUST00000173902 235 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Gm43380-201ENSMUST00000200421 220 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Gm40879-201ENSMUST00000220759 612 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.64■□□□□ 0.09
Col16a1Q8BLX7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm24791-201ENSMUST00000104284 131 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm13351-201ENSMUST00000118087 414 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm11578-201ENSMUST00000118530 459 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm11960-201ENSMUST00000122068 925 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm25554-201ENSMUST00000158075 113 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm7719-201ENSMUST00000182374 975 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm6855-201ENSMUST00000206307 790 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 AC153962.2-201ENSMUST00000219417 550 ntBASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col16a1Q8BLX7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm11560-201ENSMUST00000117567 948 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm42433-201ENSMUST00000196806 940 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms