Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp2bQ8BJF9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp2bQ8BJF9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2bQ8BJF9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm43818-201ENSMUST00000200605 466 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2bQ8BJF9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms