Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm5950-201ENSMUST00000213337 772 ntBASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Gm39404-201ENSMUST00000216350 313 ntBASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Depdc1bQ8BH88 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm4034-201ENSMUST00000187674 480 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm42599-201ENSMUST00000201308 469 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm44958-201ENSMUST00000203734 736 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm13097-201ENSMUST00000210722 397 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.21□□□□□ -0.29
Depdc1bQ8BH88 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Depdc1bQ8BH88 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm13875-201ENSMUST00000120162 282 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm37201-201ENSMUST00000191845 523 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Gm5363-201ENSMUST00000211927 938 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Rubie-203ENSMUST00000227803 2430 ntBASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms