Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smndc1Q8BGT7 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm13612-201ENSMUST00000119276 390 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm6152-201ENSMUST00000151704 340 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm6091-201ENSMUST00000098307 165 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smndc1Q8BGT7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm14716-201ENSMUST00000120138 718 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm29649-201ENSMUST00000185649 419 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm18473-201ENSMUST00000220543 868 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smndc1Q8BGT7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms