Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Samm50Q8BGH2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm44405-201ENSMUST00000198952 126 ntBASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm43758-201ENSMUST00000199500 367 ntBASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm7783-201ENSMUST00000204795 781 ntBASIC14.25□□□□□ -0.13
Samm50Q8BGH2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Samm50Q8BGH2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm13350-201ENSMUST00000120519 479 ntBASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Samm50Q8BGH2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms