Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim50Q810I2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm43758-201ENSMUST00000199500 367 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm3961-201ENSMUST00000204425 994 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Gm19994-201ENSMUST00000217086 586 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.84□□□□□ -0.51
Trim50Q810I2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim50Q810I2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim50Q810I2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim50Q810I2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim50Q810I2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim50Q810I2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim50Q810I2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim50Q810I2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.83□□□□□ -0.52
Trim50Q810I2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Gm3096-201ENSMUST00000185770 364 ntBASIC11.83□□□□□ -0.52
Trim50Q810I2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Gm43822-201ENSMUST00000200285 476 ntBASIC11.83□□□□□ -0.52
Trim50Q810I2 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.83□□□□□ -0.52
Trim50Q810I2 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.83□□□□□ -0.52
Trim50Q810I2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim50Q810I2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim50Q810I2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim50Q810I2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms