Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm5616-201ENSMUST00000165252 384 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm8741-201ENSMUST00000174736 384 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm7467-201ENSMUST00000185173 652 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm37835-201ENSMUST00000193305 361 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm43452-201ENSMUST00000201873 991 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm18304-201ENSMUST00000189162 546 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm18165-201ENSMUST00000217426 928 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.32□□□□□ -0.6
Pif1Q80SX8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pif1Q80SX8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Mir7032-201ENSMUST00000185154 79 ntBASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm9555-201ENSMUST00000200908 583 ntBASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.31□□□□□ -0.6
Pif1Q80SX8 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.31□□□□□ -0.6
Pif1Q80SX8 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.31□□□□□ -0.6
Pif1Q80SX8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 255.3 ms