Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx55Q6ZPL9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gm4034-201ENSMUST00000187674 480 ntBASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gm17931-201ENSMUST00000208132 634 ntBASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx55Q6ZPL9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ddx55Q6ZPL9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm13600-201ENSMUST00000117949 744 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm14219-201ENSMUST00000120414 288 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm15744-201ENSMUST00000161734 213 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm22877-201ENSMUST00000175451 105 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Gm5298-201ENSMUST00000201122 892 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx55Q6ZPL9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm12990-201ENSMUST00000120372 468 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm7150-201ENSMUST00000122032 981 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm24398-201ENSMUST00000157870 109 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm29410-201ENSMUST00000188383 694 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm38151-201ENSMUST00000195085 289 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm45113-201ENSMUST00000207518 165 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm6108-201ENSMUST00000208365 367 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms