Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm8152-201ENSMUST00000120842 637 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm9791-201ENSMUST00000060997 447 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm14921-201ENSMUST00000118643 908 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm6216-201ENSMUST00000182390 687 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm27149-201ENSMUST00000184716 1266 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 Mir8093-201ENSMUST00000185043 137 ntBASIC10.29□□□□□ -0.76
Rif1Q6PR54 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rif1Q6PR54 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm11957-201ENSMUST00000118304 779 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm6606-201ENSMUST00000193613 947 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm43547-201ENSMUST00000197729 328 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm7727-201ENSMUST00000219830 671 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm39404-201ENSMUST00000216350 313 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.28□□□□□ -0.76
Rif1Q6PR54 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rif1Q6PR54 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.27□□□□□ -0.76
Rif1Q6PR54 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.27□□□□□ -0.76
Rif1Q6PR54 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms