Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm28631-201ENSMUST00000190740 334 ntBASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm18307-201ENSMUST00000206864 949 ntBASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf220Q6PDX6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Mir7654-201ENSMUST00000185082 70 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gm6218-201ENSMUST00000219812 628 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Itm2b-204ENSMUST00000228637 783 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms