Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Gm29155-201ENSMUST00000185910 269 ntBASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Gm18059-201ENSMUST00000208073 580 ntBASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd4Q6PDQ2 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm18968-201ENSMUST00000221319 862 ntBASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd4Q6PDQ2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Gm9089-201ENSMUST00000122027 526 ntBASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Chd4Q6PDQ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms