Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm12314-201ENSMUST00000118104 538 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm17150-201ENSMUST00000165577 381 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm8602-201ENSMUST00000184045 607 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm29127-201ENSMUST00000188304 517 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Gm44958-201ENSMUST00000203734 736 ntBASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smarcd3Q6P9Z1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms