Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Gm15617-201ENSMUST00000118973 771 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
VcanQ62059 Gm43671-201ENSMUST00000200422 433 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Gm8268-201ENSMUST00000209683 458 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
VcanQ62059 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.08□□□□□ -0.64
VcanQ62059 Gm6946-201ENSMUST00000182237 987 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Gm43380-201ENSMUST00000200421 220 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Gm42689-201ENSMUST00000202403 404 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
VcanQ62059 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.07□□□□□ -0.64
VcanQ62059 Gm16441-201ENSMUST00000138176 924 ntBASIC11.07□□□□□ -0.64
VcanQ62059 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.07□□□□□ -0.64
VcanQ62059 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Gm3635-201ENSMUST00000212314 354 ntBASIC11.07□□□□□ -0.64
VcanQ62059 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Gm24231-201ENSMUST00000104315 133 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Mir6934-201ENSMUST00000183965 62 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.07□□□□□ -0.64
VcanQ62059 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.07□□□□□ -0.64
VcanQ62059 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Gm25562-201ENSMUST00000104608 133 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Gm26313-201ENSMUST00000157770 308 ntBASIC11.07□□□□□ -0.64
VcanQ62059 Gm6612-201ENSMUST00000170777 395 ntBASIC11.07□□□□□ -0.64
VcanQ62059 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.07□□□□□ -0.64
VcanQ62059 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VcanQ62059 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
VcanQ62059 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.06□□□□□ -0.64
VcanQ62059 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
VcanQ62059 Gm21577-201ENSMUST00000190823 697 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Gm20802-201ENSMUST00000190832 698 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Gm5040-201ENSMUST00000218609 800 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
VcanQ62059 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.06□□□□□ -0.64
VcanQ62059 Gm8574-201ENSMUST00000203207 924 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Gm18124-201ENSMUST00000210695 706 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.06□□□□□ -0.64
VcanQ62059 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.06□□□□□ -0.64
VcanQ62059 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms