Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm8325-201ENSMUST00000099086 453 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rai1Q61818 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.58□□□□□ -0.56
Rai1Q61818 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rai1Q61818 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rai1Q61818 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Gm29410-201ENSMUST00000188383 694 ntBASIC11.58□□□□□ -0.56
Rai1Q61818 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.58□□□□□ -0.56
Rai1Q61818 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.58□□□□□ -0.56
Rai1Q61818 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.58□□□□□ -0.56
Rai1Q61818 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rai1Q61818 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.58□□□□□ -0.56
Rai1Q61818 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rai1Q61818 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rai1Q61818 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Rai1Q61818 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm14942-201ENSMUST00000119642 336 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm10807-201ENSMUST00000177134 795 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.57□□□□□ -0.56
Rai1Q61818 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rai1Q61818 Gm25766-201ENSMUST00000104101 131 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Gm13600-201ENSMUST00000117949 744 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.57□□□□□ -0.56
Rai1Q61818 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Gm7940-201ENSMUST00000218195 769 ntBASIC11.57□□□□□ -0.56
Rai1Q61818 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rai1Q61818 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rai1Q61818 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rai1Q61818 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Rai1Q61818 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rai1Q61818 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rai1Q61818 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rai1Q61818 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.56□□□□□ -0.56
Rai1Q61818 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rai1Q61818 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms