Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.36□□□□□ -0.59
Sox17Q61473 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Sox17Q61473 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox17Q61473 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox17Q61473 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sox17Q61473 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Sox17Q61473 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox17Q61473 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Gm9136-201ENSMUST00000193368 454 ntBASIC11.36□□□□□ -0.59
Sox17Q61473 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.36□□□□□ -0.59
Sox17Q61473 Gm2423-201ENSMUST00000074863 733 ntBASIC11.36□□□□□ -0.59
Sox17Q61473 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sox17Q61473 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.36□□□□□ -0.59
Sox17Q61473 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox17Q61473 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox17Q61473 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox17Q61473 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Sox17Q61473 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm18304-201ENSMUST00000189162 546 ntBASIC11.35□□□□□ -0.59
Sox17Q61473 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm7287-201ENSMUST00000205267 602 ntBASIC11.35□□□□□ -0.59
Sox17Q61473 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Sox17Q61473 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.35□□□□□ -0.59
Sox17Q61473 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.35□□□□□ -0.59
Sox17Q61473 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox17Q61473 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox17Q61473 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox17Q61473 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox17Q61473 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.34□□□□□ -0.59
Sox17Q61473 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox17Q61473 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox17Q61473 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sox17Q61473 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox17Q61473 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox17Q61473 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms