Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Six4Q61321 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Six4Q61321 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.23□□□□□ -0.45
Six4Q61321 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Six4Q61321 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gm37666-201ENSMUST00000194110 866 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Gm7003-201ENSMUST00000195089 312 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Gm17812-201ENSMUST00000204935 318 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.23□□□□□ -0.45
Six4Q61321 Gm45186-201ENSMUST00000206874 478 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.23□□□□□ -0.45
Six4Q61321 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.23□□□□□ -0.45
Six4Q61321 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Cog3-203ENSMUST00000227473 4197 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.23□□□□□ -0.45
Six4Q61321 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six4Q61321 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Six4Q61321 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.22□□□□□ -0.45
Six4Q61321 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Six4Q61321 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.22□□□□□ -0.45
Six4Q61321 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Gm14130-201ENSMUST00000118417 987 ntBASIC12.22□□□□□ -0.45
Six4Q61321 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.22□□□□□ -0.45
Six4Q61321 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.22□□□□□ -0.45
Six4Q61321 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.22□□□□□ -0.45
Six4Q61321 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six4Q61321 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.22□□□□□ -0.45
Six4Q61321 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.22□□□□□ -0.45
Six4Q61321 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six4Q61321 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Six4Q61321 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.21□□□□□ -0.45
Six4Q61321 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.21□□□□□ -0.45
Six4Q61321 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Six4Q61321 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Gm24749-201ENSMUST00000157838 343 ntBASIC12.21□□□□□ -0.45
Six4Q61321 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six4Q61321 Gm5616-201ENSMUST00000165252 384 ntBASIC12.21□□□□□ -0.45
Six4Q61321 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms