Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm26956-201ENSMUST00000182176 986 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.62□□□□□ -0.39
Trim38Q5SZ99 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Map1b-203ENSMUST00000223725 2669 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Gm25214-201ENSMUST00000104573 129 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Gm13297-201ENSMUST00000120205 934 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Mir7085-201ENSMUST00000184353 66 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Gm10608-202ENSMUST00000213924 676 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Gm10478-201ENSMUST00000084451 396 ntBASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim38Q5SZ99 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim38Q5SZ99 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms