Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Gm25732-201ENSMUST00000175168 60 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Mir7070-201ENSMUST00000183657 86 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Gm28071-201ENSMUST00000190355 478 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Rps4l-202ENSMUST00000204242 789 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps54Q5SPW0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.55□□□□□ -0.08
Vps54Q5SPW0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gm27390-201ENSMUST00000184516 176 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps54Q5SPW0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Gm11509-201ENSMUST00000117358 325 ntBASIC14.53□□□□□ -0.08
Vps54Q5SPW0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Gm18730-201ENSMUST00000218038 343 ntBASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Matn2-203ENSMUST00000226766 3252 ntBASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms