Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm23912-201ENSMUST00000104687 87 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.85□□□□□ -0.19
Ccdc88aQ5SNZ0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm43186-201ENSMUST00000198130 824 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm23596-201ENSMUST00000104304 132 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm28686-201ENSMUST00000187404 609 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm37458-201ENSMUST00000194055 410 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm43184-201ENSMUST00000197247 542 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Gm9111-201ENSMUST00000219394 709 ntBASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc88aQ5SNZ0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms