Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rc3h1Q4VGL6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm42997-202ENSMUST00000200321 985 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm4157-201ENSMUST00000211647 679 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Spcs1-203ENSMUST00000226374 592 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm21811-201ENSMUST00000096485 930 ntBASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rc3h1Q4VGL6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm22902-201ENSMUST00000158488 302 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm8343-201ENSMUST00000182705 994 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm19353-201ENSMUST00000184561 445 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm37246-201ENSMUST00000192665 835 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm37986-201ENSMUST00000193285 383 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm43184-201ENSMUST00000197247 542 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm43378-201ENSMUST00000199336 582 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm43947-201ENSMUST00000203019 959 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm9797-202ENSMUST00000218003 294 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rc3h1Q4VGL6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms