Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx49Q4FZF3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx49Q4FZF3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm11956-201ENSMUST00000119525 512 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm14585-201ENSMUST00000120713 634 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm22138-201ENSMUST00000158748 128 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm8343-201ENSMUST00000182705 994 ntBASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx49Q4FZF3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx49Q4FZF3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx49Q4FZF3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms