Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Syne3Q4FZC9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm25043-201ENSMUST00000158604 212 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm45865-201ENSMUST00000211815 945 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm21769-201ENSMUST00000211922 111 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm5950-201ENSMUST00000213337 772 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm24136-201ENSMUST00000083374 165 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.91□□□□□ -0.34
Syne3Q4FZC9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.91□□□□□ -0.34
Syne3Q4FZC9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm11531-201ENSMUST00000117614 555 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm31256-201ENSMUST00000194705 506 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Syne3Q4FZC9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Syne3Q4FZC9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Syne3Q4FZC9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms